Publications of Carsten Jäger

Brammerloh, M., Morawski, M., Friedrich, I., Reinert, T., Lange, C., Pelicon, P., … Kirilina, E. (2021). Measuring the iron content of dopaminergic neurons in substantia nigra with MRI relaxometry. NeuroImage, 239. doi:10.1016/j.neuroimage.2021.118255

Schober, R., Hilbrich, I., Jäger, C., & Holzer, M. (2021). Senile plaque calcification of the lamina circumvoluta medullaris in Alzheimer's disease. Neuropathology. doi:10.1111/neup.12742

Eichner, C., Paquette, M., Mildner, T., Schlumm, T., Pléh, K., Samuni, L., … Anwander, A. (2020). Increased sensitivity and signal-to-noise ratio in diffusion-weighted MRI using multi-echo acquisitions. NeuroImage, 221. doi:10.1016/j.neuroimage.2020.117172

Papazoglou, S., Streubel, T., Ashtarayeh, M., Pine, K., Edwards, L., Brammerloh, M., … Mohammadi, S. (2019). Biophysically motivated efficient estimation of the spatially isotropic R∗2 component from a single gradient-recalled echo measurement. Magnetic Resonance in Medicine, 82, 1804–1811.

Natu, V. S., Gomez, J., Barnett, M., Jeska, B., Kirilina, E., Jäger, C., … Grill-Spector, K. (2019). Apparent thinning of human visual cortex during childhood is associated with myelination. Proceedings of the National Academy of Sciences of the United States of America, 116, 20750–20759.

Georgi, J., Metere, R., Jäger, C., Morawski, M., & Möller, H. E. (2019). Influence of the extracellular matrix on water mobility in subcortical gray matter. Magnetic Resonance in Medicine, 81, 1265–1279.

Morawski, M., Kirilina, E., Scherf, N., Jäger, C., Reimann, K., Trampel, R., … Weiskopf, N. (2018). Developing 3D microscopy with CLARITY on human brain tissue: Towards a tool for informing and validating MRI-based histology. NeuroImage, 182, 417–428.

Mordhorst, L., Morozova, M., Papazoglou, S., Fricke, B., Oeschger, J. M., Rusch, H., … Mohammadi, S. (2021). Human axon radii estimation at MRI scale: Deep learning combined with large-scale light microscopy. In Proceedings of the 2021 German Workshop on Medical Image Computing. Wiesbaden: Springer. Retrieved from http://hdl.handle.net/21.11116/0000-0008-6A2F-E

Thierbach, K., Bazin, P.-L., de Back, W., Gavriilidis, F., Kirilina, E., Jäger, C., … Scherf, N. (2018). Combining deep learning and active contours opens the way to robust, automated analysis of brain cytoarchitectonics. In Machine Learning in Medical Imaging 2018 (pp. 179–187). Cham: Springer.

Eichner, C., Paquette, M., Gallardo, G., Bock, C., Gräßle, T., Jaffe, J. E., … Anwander, A. (2021). Developmental brain connectivity in chimpanzees using high-resolution diffusion MRI. In Proceedings of the 27th Annual Meeting of the Organization for Human Brain Mapping (OHBM) (Vol. 27). Retrieved from http://hdl.handle.net/21.11116/0000-0008-D462-A

Lipp, I., Kirilina, E., Jäger, C., Morawski, M., Jauch, A., Valk, S. L., … Weiskopf, N. (2021). Exploring large-scale cortical organization in chimpanzees: Probing myeloarchitecture with qMRI. In Proceedings of the 27th Annual Meeting of the Organization for Human Brain Mapping (OHBM) (Vol. 27). Retrieved from http://hdl.handle.net/21.11116/0000-0008-D0D4-D

Edwards, L., Kirilina, E., Jäger, C., Garus, K., Cremer, M., Amunts, K., & Weiskopf, N. (2021). Scanning post mortem fixed whole human brain for advanced higher order diffusion modelling using a 300 mT/m whole-body MRI scanner. In Proceedings of the 2021 Annual Meeting of the International Society for Magnetic Resonance in Medicine (pp. 2034–2034). Virtual.

Edwards, L., Jäger, C., Kirilina, E., Herrmann, K.-H., Pine, K., Scheibe, P., … Weiskopf, N. (2021). Exploring quantitative MRI contrast in posterior cortical atrophy using ex vivo imaging. In Proceedings of the 27th Annual Meeting of the Organization for Human Brain Mapping (OHBM) (pp. 1489–1489). Virtual.

Eichner, C., Paquette, M., Gallardo, G., Bock, C., Jaffe, J. E., Jäger, C., … Anwander, A. (2021). High-resolution post-mortem diffusion MRI acquisitions for connectivity analyses in chimpanzees. In Proceedings of the 29th Annual Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM) (Vol. 29). Retrieved from http://hdl.handle.net/21.11116/0000-0008-EA5E-8

Gkotsoulias, D., Metere, R., Su, Y., Eichner, C., Schlumm, T., Müller, R., … Möller, H. E. (2021). High angular resolution susceptibility and diffusion imaging in post mortem chimpanzee brain: Tensor characteristics and similarities. In Proceedings of the 29th Annual Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM) (Vol. 29). Retrieved from http://hdl.handle.net/21.11116/0000-0008-D464-8

Eichner, C., Paquette, M., Mildner, T., Schlumm, T., Crockford, C., Wittig, R. M., … Anwander, A. (2020). Sensitivity gain from multi-echo acquisitions in ex-vivo diffusion imaging: Numerical simulations and experimental verification. In Proceedings of the 28th Annual Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM) (Vol. 28). Retrieved from http://hdl.handle.net/21.11116/0000-0006-D4B1-2

Lipp, I., Kirilina, E., Jäger, C., Morawski, M., Jauch, A., Pine, K., … Weiskopf, N. (2020). Evolution of cortical myelination in chimpanzees. In Proceedings of the 26th Annual Meeting of the Organization for Human Brain Mapping (OHBM) (Vol. 26). Retrieved from http://hdl.handle.net/21.11116/0000-0006-B728-F

Morozova, M., Rusch, H., Jäger, C., Anwander, A., Mohammadi, S., Geyer, S., … Morawski, M. (2020). Analysis of fiber characteristics in the isthmus of the corpus callosum: Aboitiz et al. revisited. In Proceedings of the 26th Annual Meeting of the Organization for Human Brain Mapping (OHBM) (Vol. 26). Retrieved from http://hdl.handle.net/21.11116/0000-0006-B72F-8

Morozova, M., Rusch, H., Jäger, C., Anwander, A., Mohammadi, S., Morawski, M., & Geyer, S. (2019). The corticospinal tract in the human medulla oblongata: A high-resolution microscopic analysis. In Proceedings of the 25th Annual Meeting of the Organization for Human Brain Mapping (OHBM) (Vol. 25). Retrieved from http://hdl.handle.net/21.11116/0000-0003-BCD0-E

Eichner, C., Mildner, T., Paquette, M., Schlumm, T., Crockford, C., Wittig, R. M., … Anwander, A. (2019). Multi-echo segmented diffusion-weighted MRI for ex-vivo whole-brain measurements with 300mT/m gradients. In Proceedings of the 27th Annual Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM) (Vol. 27). Retrieved from http://hdl.handle.net/21.11116/0000-0003-ABEE-1