Publications of Nico Scherf

Poster (2)

2019
Poster
Podranski, K., Zhang, R., Thierbach, K., Thieleking, R., Witte, A. V., Villringer, A., … Scherf, N. Detecting fat artifacts in diffusion MRI with deep learning. Poster presented at the 9th IMPRS NeuroCom Summer School, Leipzig, Germany. Retrieved from http://hdl.handle.net/21.11116/0000-0004-C6C1-2
2018
Poster
Podranski, K., Scherf, N., & Weiskopf, N. Improving high-resolution qunatitative MRI maps for in-vivo histology MRI of the human brain. Poster presented at the Medical Imaging Summer School 2018 - Medical Imaging Meets Deep Learning, Favignana, Italy. Retrieved from http://hdl.handle.net/21.11116/0000-0004-C6C8-B

Manuscript (1)

2019
Manuscript
Kloenne, M., Niehaus, S., Lampe, L., Merola, A., Reinelt, J., & Scherf, N. (2019, September 27). A framework for CT image segmentation inspired by the clinical environment. arXiv. Retrieved from http://hdl.handle.net/21.11116/0000-0004-C770-D

Preprint (6)

2021
Preprint
Waschke, J., Hlawitschka, M., Anlas, K., Trivedi, V., Roeder, I., Huisken, J., & Scherf, N. (2021, January 8). linus: Conveniently explore, share, and present large-scale biological trajectory data from a web browser. BioRxiv. doi:10.1101/2020.04.17.043323
2020
Preprint
Hoffmann, H., Baldow, C., Zerjatke, T., Gottschalk, A., Wagner, S., Karg, E., … Scherf, N. (2020, December 7). How to predict relapse in leukaemia using time series data: A comparative in silico study. MedRxiv. doi:10.1101/2020.12.04.20243907
Preprint
Horlava, N., Mironenko, A., Niehaus, S., Wagner, S., Roeder, I., & Scherf, N. (2020, November 11). A comparative study of semi- and self-supervised semantic segmentation of biomedical microscopy data. ArXiv. Retrieved from http://hdl.handle.net/21.11116/0000-0007-D2FB-1
Preprint
Wagner, S., Thierbach, K., Zerjatke, T., Glauche, I., Roeder, I., & Scherf, N. (2020, February 14). TraCurate: Efficiently curating cell tracks. BioRxiv. doi:10.1101/2020.02.14.936740
2018
Preprint
Thierbach, K., Bazin, P.-L., De Back , W., Gavriilidis, F., Kirilina, E., Jäger, C., … Scherf, N. (2018, April 9). Combining deep learning and active contours opens the way to robust, automated analysis of brain cytoarchitectonics. BioRxiv. doi:10.1101/297689
2017
Preprint
Shah, G., Thierbach, K., Schmid, B., Reade, A., Roeder, I., Scherf, N., & Huisken, J. (2017, August 9). Pan-embryo cell dynamics of germlayer formation in zebrafish. BioRxiv. doi:10.1101/173583
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