Publications of Siawoosh Mohammadi

Emmenegger, T., David, G., Mohammadi, S., Ziegler, G., Callaghan, M. F., Thompson, A., … Freund, P. (2024). Temporal dynamics of white and gray matter plasticity during motor skill acquisition: A comparative diffusion tensor imaging and multiparametric mapping analysis. Cerebral Cortex, 34. doi:10.1093/cercor/bhae344

Emmenegger, T., David, G., Mohammadi, S., Ziegler, G., Callaghan, M. F., Thompson, A., … Freund, P. Temporal dynamics of white and grey matter plasticity during motor skill acquisition: A comparative DTI and qMRI analysis. Cerebral Cortex. Retrieved from http://hdl.handle.net/21.11116/0000-000F-B14C-4

Oeschger, J. M., Tabelow, K., & Mohammadi, S. (2024). Investigating apparent differences between standard DKI and axisymmetric DKI and its consequences for biophysical parameter estimates. Magnetic Resonance in Medicine, 92, 69–81.

Papazoglou, S., Ashtarayeh, M., Oeschger, J. M., Callaghan, M. F., Does, M. D., & Mohammadi, S. (2024). Insights and improvements in correspondence between axonal volume fraction measured with diffusion‐weighted MRI and electron microscopy. NMR in Biomedicine, 37. doi:10.1002/nbm.5070

Woletz, M., Chalupa‐Gantner, F., Hager, B., Ricke, A., Mohammadi, S., Binder, S., … Nagy, Z. (2024). Toward printing the brain: A microstructural ground truth phantom for MRI. Advanced Materials Technologies, 9. doi:10.1002/admt.202300176

Fritz, F. J., Mordhorst, L., Ashtarayeh, M., Periquito, J., Pohlmann, A., Morawski, M., … Mohammadi, S. (2023). Fiber-orientation independent component of R2* obtained from single-orientation MRI measurements in simulations and a post-mortem human optic chiasm. Frontiers in Neuroscience, 17. doi:10.3389/fnins.2023.1133086

Oeschger, J. M., Tabelow, K., & Mohammadi, S. (2023). Axisymmetric diffusion kurtosis imaging with Rician bias correction: A simulation study. Magnetic Resonance in Medicine, 89, 787–799.

Milotta, G., Corbin, N., Lambert, C., Lutti, A., Mohammadi, S., & Callaghan, M. F. (2023). Mitigating the impact of flip angle and orientation dependence in single compartment R2* estimates via 2-pool modeling. Magnetic Resonance in Medicine, 89, 128–143.

Mohammadi, S., Streubel, T., Klock, L., Edwards, L., Lutti, A., Pine, K., … Tabelow, K. (2022). Error quantification in multi-parameter mapping facilitates robust estimation and enhanced group level sensitivity. NeuroImage, 262. doi:10.1016/j.neuroimage.2022.119529

Mordhorst, L., Morozova, M., Papazoglou, S., Fricke, B., Oeschger, J. M., Tabarin, T., … Mohammadi, S. (2022). Towards a representative reference for MRI-based human axon radius assessment using light microscopy. NeuroImage, 249. doi:10.1016/j.neuroimage.2022.118906

Rusch, H., Brammerloh, M., Stieler, J., Sonntag, M., Mohammadi, S., Weiskopf, N., … Morawski, M. (2022). Finding the best clearing approach: Towards 3D wide-scale multimodal imaging of aged human brain tissue. NeuroImage, 247. doi:10.1016/j.neuroimage.2021.118832

David, G., Pfyffer, D., Vallotton, K., Pfender, N., Thompson, A., Weiskopf, N., … Freund, P. (2021). Longitudinal changes of spinal cord grey and white matter following spinal cord injury. Journal of Neurology, Neurosurgery & Psychiatry, 92, 1222–1230.

Clark, I. A., Callaghan, M. F., Weiskopf, N., Maguire, E. A., & Mohammadi, S. (2021). Reducing susceptibility distortion related image blurring in diffusion MRI EPI data. Frontiers in Neuroscience, 15. doi:10.3389/fnins.2021.706473

Weiskopf, N., Edwards, L., Helms, G., Mohammadi, S., & Kirilina, E. (2021). Quantitative magnetic resonance imaging of brain anatomy and in vivo histology. Nature Reviews Physics, 3, 570–588.

Emmenegger, T. M., David, G., Ashtarayeh, M., Fritz, F. J., Ellerbrock, I., Helms, G., … Mohammadi, S. (2021). The influence of radio-frequency transmit field inhomogeneities on the accuracy of g-ratio weighted imaging. Frontiers in Neuroscience, 15. doi:10.3389/fnins.2021.674719

Mohammadi, S., & Callaghan, M. F. (2021). Towards in vivo g-ratio mapping using MRI: Unifying myelin and diffusion imaging. Journal of Neuroscience Methods, 348. doi:10.1016/j.jneumeth.2020.108990

Papazoglou, S., Streubel, T., Ashtarayeh, M., Pine, K., Edwards, L., Brammerloh, M., … Mohammadi, S. (2019). Biophysically motivated efficient estimation of the spatially isotropic R∗2 component from a single gradient-recalled echo measurement. Magnetic Resonance in Medicine, 82, 1804–1811.

von Schwanenflug, N., Müller, D. K., King, J. A., Ritschel, F., Bernardoni, F., Mohammadi, S., … Ehrlich, S. (2019). Dynamic changes in white matter microstructure in anorexia nervosa: Findings from a longitudinal study. Psychological Medicine, 49, 1555–1564.

Grabher, P., Mohammadi, S., David, G., & Freund, P. (2017). Neurodegeneration in the spinal ventral horn prior to motor impairment in cervical spondylotic myelopathy. Journal of Neurotrauma, 34, 2329–2334.

Mohammadi, S., Callaghan, M. F., Kirilina, E., & Edwards, L. (2024). Quantifying brain microstructure using MRI. In J. H. Grafman (Ed.), Reference Module in Neuroscience and Biobehavioral Psychology (2nd ed, pp. 346–359). Elsevier.